Project A06

A06

Viral Diversity, Viral De Novo Assembly, and Viral Half-Life in Groundwater
Project A06
Image: CRC AquaDiva

Groundwater serves as drinking water. Drinking water should be nonpathogenic, but each year we are faced with outbreaks originating from viruses in groundwater or surface water. Project A06 aims to show (i) that groundwater harbors one or two orders of magnitude more viruses than currently detected; (ii) a correlation between the bacterial and viral community and their nucleic adid modification signature; (iii) that viruses are infective without the host for more than two months; (iv) direct virus-host interaction; and to (v) develop a high-throughput pipeline for multiple bacteria simultaneously.

Impressions from project A06

Discovery of groundwater biodiversity with long-read genome sequencing (In-house MinION sequencing).

Video: M. Marz (Project A06)

Project Leader

Manja Marz Manja Marz Image: Manja Marz

Prof. Dr. Manja Marz

Bioinformatics/High Throughput Analysis
Faculty of Mathematics and Computer Science
Friedrich Schiller University
Leutragraben 1
07743 Jena
Phone: +49 (0)3641 946480
e-mail

Staff

Christian Höner zu Siederdissen Christian Höner zu Siederdissen Image: Christian Höner

Dr. Christian Höner zu Siederdissen

Postdoctoral Researcher

Bioinformatics/High Throughput Analysis
Faculty of Mathematics and Computer Science
Friedrich Schiller University
Leutragraben 1
07743 Jena
Phone: +49 (0)3641 946485
e-mail

Akash Srivastava Akash Srivastava Image: Akash Srivastava

Dr. Akash Srivastava

Associated Postdoctoral Researcher

Bioinformatics/High Throughput Analysis
Faculty of Mathematics and Computer Science
Friedrich Schiller University
Leutragraben 1
07743 Jena

Affiliated with the Department of Neurology, University Hospital Jena

Phone: +49 (0)3641 656828
e-mail

Franziska Hufsky Franziska Hufsky Image: Augenwerke Fotografie, Nadine Grimm

Dr. Franziska Hufsky

Associated Postdoctoral Researcher

Bioinformatics/High Throughput Analysis
Faculty of Mathematics and Computer Science
Friedrich Schiller University
Leutragraben 1
07743 Jena
Phone: +49 (0)3641 946482
e-mail

 

 

Martin Hölzer Martin Hölzer Image: Martin Hölzer

Dr. Martin Hölzer

Associated Researcher

Bioinformatics Unit
Robert Koch-Institute
Nordufer 20
13353 Berlin
Phone: +49 30 18754 5208
e-mail

Sebastian Krautwurst Sebastian Krautwurst Image: Sebastian Krautwurst

Sebastian Krautwurst

Associated Doctoral Researcher

Bioinformatics/High Throughput Analysis
Faculty of Mathematics and Computer Science
Friedrich Schiller University
Leutragraben 1
07743 Jena
Phone: +49 (0)3641 946483
e-mail